STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N2Q1H5Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
A0A3N2PYP9
Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.905
A0A3N2Q4C5
Brix domain-containing protein.
   
    0.848
A0A3N2PUG4
Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.827
A0A3N2Q6R9
RRM domain-containing protein.
   
    0.817
A0A3N2Q2H9
Ebp2-domain-containing protein.
   
    0.805
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.771
A0A3N2PN86
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.770
A0A3N2PM29
Brix domain-containing protein.
   
    0.749
A0A3N2PR50
CP-type G domain-containing protein.
   
   0.740
A0A3N2PKT2
Brix domain-containing protein 2.
   
    0.736
Your Current Organism:
Sodiomyces alkalinus
NCBI taxonomy Id: 1314773
Other names: Plectosphaerellaceae sp. AGG-2013 F11, S. alkalinus F11, Sodiomyces alkalinus F11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.