STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N2Q369Uncharacterized protein. (572 aa)    
Predicted Functional Partners:
A0A3N2PNF9
Uncharacterized protein.
    
 0.789
A0A3N2Q2K2
Uncharacterized protein.
    
 0.789
A0A3N2Q9X8
Uncharacterized protein.
    
 0.789
A0A3N2PLQ6
Putative ribosomal assembly complex component Ipi3.
   
 0.609
A0A3N2PSS1
Pre-rRNA-processing protein IPI1.
    
 0.601
A0A3N2PPE1
WSC-domain-containing protein.
    
 0.574
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.559
A0A3N2PJ69
BZIP domain-containing protein.
    
 0.505
A0A3N2PMM4
GRC3 protein.
    
  0.491
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.487
Your Current Organism:
Sodiomyces alkalinus
NCBI taxonomy Id: 1314773
Other names: Plectosphaerellaceae sp. AGG-2013 F11, S. alkalinus F11, Sodiomyces alkalinus F11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.