STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165Y9F1LexA/Signal peptidase. (276 aa)    
Predicted Functional Partners:
A0A166DGW9
NPR2-domain-containing protein.
   
 0.968
A0A165ZEF4
WD_REPEATS_REGION domain-containing protein.
    
 0.959
A0A165YY47
WD_REPEATS_REGION domain-containing protein.
    
 0.958
A0A165ZWX2
DEP domain-containing protein.
    
 0.957
A0A166FB01
Microsomal signal peptidase 12 kDa subunit.
   
 0.886
A0A166DW75
Signal peptidase subunit 3.
   
 0.883
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.840
A0A166BAL4
Uncharacterized protein.
   
 0.840
A0A166FB46
Ku DNA-binding complex, Ku70 subunit.
     
 0.781
A0A166ISY3
Uncharacterized protein.
   
 0.747
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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