Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A165WMQ9 | A0A165Y4E1 | Polyubiquitin. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.924 |
A0A165WMQ9 | A0A165YR87 | Polyubiquitin. | MYND-type domain-containing protein. | 0.677 |
A0A165WMQ9 | A0A165ZTH8 | Polyubiquitin. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.843 |
A0A165WMQ9 | A0A166A863 | Polyubiquitin. | Mitochondrial 50S ribosomal protein L3. | 0.778 |
A0A165WMQ9 | A0A166CME8 | Polyubiquitin. | Uncharacterized protein. | 0.846 |
A0A165WMQ9 | A0A166CP28 | Polyubiquitin. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.993 |
A0A165WMQ9 | A0A166CXI7 | Polyubiquitin. | Ubiquitin-domain-containing protein. | 0.923 |
A0A165WMQ9 | A0A166IRN3 | Polyubiquitin. | Cysteine proteinase; Belongs to the peptidase C19 family. | 0.705 |
A0A165Y4E1 | A0A165WMQ9 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Polyubiquitin. | 0.924 |
A0A165Y4E1 | A0A165YR87 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | MYND-type domain-containing protein. | 0.684 |
A0A165Y4E1 | A0A166A863 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Mitochondrial 50S ribosomal protein L3. | 0.969 |
A0A165Y4E1 | A0A166CME8 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.986 |
A0A165Y4E1 | A0A166CXI7 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Ubiquitin-domain-containing protein. | 0.999 |
A0A165Y4E1 | A0A166FDW3 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Ubiquitin. | 0.924 |
A0A165Y4E1 | A0A166H8S0 | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.995 |
A0A165YR87 | A0A165WMQ9 | MYND-type domain-containing protein. | Polyubiquitin. | 0.677 |
A0A165YR87 | A0A165Y4E1 | MYND-type domain-containing protein. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.684 |
A0A165YR87 | A0A165ZTH8 | MYND-type domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.744 |
A0A165YR87 | A0A166A863 | MYND-type domain-containing protein. | Mitochondrial 50S ribosomal protein L3. | 0.693 |
A0A165YR87 | A0A166CME8 | MYND-type domain-containing protein. | Uncharacterized protein. | 0.677 |
page 1 of 4