STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165Z3F4WD_REPEATS_REGION domain-containing protein. (1525 aa)    
Predicted Functional Partners:
A0A166C4S6
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.994
A0A165ZYW9
WW domain-containing protein.
   
 0.991
A0A166A7Z3
ARF/SAR superfamily; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.986
A0A165YQ09
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.974
A0A166ENC5
Uncharacterized protein.
    
 0.974
A0A166H6X5
Uncharacterized protein.
   
 0.939
A0A166GVY5
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.937
A0A166IAI9
Het-C-domain-containing protein.
   
 0.905
A0A166APF0
Putative SEC22-synaptobrevin; Belongs to the synaptobrevin family.
    
 0.871
A0A166AA93
DDHD domain-containing protein.
    
 0.863
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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