STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166AJB0Zn(2)-C6 fungal-type domain-containing protein. (408 aa)    
Predicted Functional Partners:
A0A165YY63
Actin-related protein Arp4p; Belongs to the actin family.
    
 0.789
A0A165ZYJ0
SWIRM-domain-containing protein.
    
 0.789
A0A166G5P3
SWI/SNF complex 60 kDa subunit.
   
 0.788
A0A166J6Y0
SNF5-domain-containing protein.
    
 0.786
A0A166CNA3
C2 domain-containing protein.
    
  0.743
A0A165YKC1
Uncharacterized protein.
    
  0.730
A0A165XSF5
SWIB-domain-containing protein.
    
 0.729
A0A165X8C3
Uncharacterized protein.
    
 0.727
A0A166HCW6
Bromodomain-containing protein.
    
 0.727
A0A166HZX6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.724
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.