STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166AJE6Protein prenylyltransferase. (337 aa)    
Predicted Functional Partners:
A0A166FSL2
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.997
A0A166CEG3
Terpenoid cyclases/Protein prenyltransferase.
    
 0.995
A0A166DDB6
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.859
A0A166E789
Abi-domain-containing protein.
     
 0.857
A0A166AM36
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.853
A0A166I499
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.853
A0A166GR24
Putative farnesyltranstransferase; Belongs to the FPP/GGPP synthase family.
     
 0.852
A0A166BXU1
Squalene synthase.
     
 0.845
A0A166CFM4
Uncharacterized protein.
     
 0.816
A0A166HGE1
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
     
 0.803
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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