STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166ATF0Beta-lactamase/transpeptidase-like protein. (575 aa)    
Predicted Functional Partners:
A0A166D272
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.819
A0A166EII7
SPX domain-containing protein.
    
 0.738
A0A166II63
Pyridoxamine 5'-phosphate oxidase.
    
  0.706
A0A166IPP9
NUC189-domain-containing protein.
   
 0.659
A0A166BAZ2
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.658
A0A166FY16
Nop domain-containing protein.
   
  0.650
A0A166BNK6
Small-subunit processome.
    
  0.649
A0A166BV90
Nep1-domain-containing protein.
   
  0.649
A0A166DK49
WD40 repeat-like protein.
    
  0.649
A0A166FZL3
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.649
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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