STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166BD04BTP domain-containing protein. (540 aa)    
Predicted Functional Partners:
A0A166DD14
TAFII28-domain-containing protein.
   
 0.955
A0A166DTD9
TAF-domain-containing protein.
    
 0.955
A0A166G778
Uncharacterized protein.
    
 0.954
A0A166I6R4
TFIID_20kDa domain-containing protein.
    
 0.954
A0A166HGG0
Uncharacterized protein.
    
 0.953
A0A166CIG6
TAF4 domain-containing protein.
    
 0.952
A0A166FP88
TAFII55_N domain-containing protein.
    
 0.948
A0A166HVG1
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.934
A0A165YXX2
Uncharacterized protein.
    
 0.874
A0A166EJP8
TFIID-31kDa-domain-containing protein.
    
 0.865
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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