STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166BWP4DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1459 aa)    
Predicted Functional Partners:
A0A166IN79
EXOSC1 domain-containing protein.
   
 0.974
A0A165YQ34
Ribosomal protein S5 domain 2-like protein.
   
 0.973
A0A166CII7
Uncharacterized protein.
   
 0.970
A0A166CW36
Uncharacterized protein.
   
 0.969
A0A166D810
RNase_PH domain-containing protein.
   
 0.969
A0A165ZEP9
Exosome complex exonuclease rrp4.
   
 0.968
A0A166GVF4
mRNA transport regulator 3.
   
 0.962
A0A166CCW7
Antiviral helicase.
   
 0.955
A0A166I939
Ribosomal protein S5 domain 2-like protein.
   
 0.951
A0A166DGI2
Uncharacterized protein.
   
 
 0.914
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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