STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166CKA0Di-copper centre-containing protein. (508 aa)    
Predicted Functional Partners:
A0A166G886
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.731
A0A165ZYD4
RBP11-like subunits of RNA polymerase.
    
 0.719
A0A166AC49
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.719
A0A166BPB9
RNA polymerase Rpb6.
    
 0.719
A0A166C2Y0
Uncharacterized protein.
    
 0.719
A0A166CRA6
RPOL4c domain-containing protein.
    
 0.719
A0A166DYJ7
Uncharacterized protein.
    
 0.719
A0A166GAW4
Insert subdomain of RNA polymerase alpha subunit.
    
 0.719
A0A166GZ39
RPB5 subunit of DNA-directed RNA polymerase.
    
 0.719
A0A166IZ18
Uncharacterized protein.
    
 0.719
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
Server load: low (18%) [HD]