STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166E771Uncharacterized protein. (935 aa)    
Predicted Functional Partners:
A0A165Y970
Nucleic acid-binding protein.
   
 0.983
A0A165WYY2
3'-5' exonuclease domain-containing protein.
    
 0.971
A0A165XYK3
3'-5' exonuclease domain-containing protein.
    
 0.971
A0A166EH04
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.971
A0A166F1P7
Ribonuclease H-like protein.
    
 0.971
A0A166FCS6
Recombination protein Rad52.
    
 0.968
A0A166GWS0
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
   
 0.964
A0A166ERN8
Dna2-domain-containing protein.
    
 0.958
A0A166DZF7
DNA helicase; Belongs to the MCM family.
   
 0.954
A0A166HRQ6
Rad51 domain-containing protein.
  
 0.954
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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