Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A166A2M6 | A0A166BA20 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Malic enzyme. | 0.894 |
A0A166A2M6 | A0A166CCB5 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Malic enzyme. | 0.894 |
A0A166A2M6 | A0A166D272 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.829 |
A0A166A2M6 | A0A166EIH7 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NAD dehydrogenase. | 0.866 |
A0A166A2M6 | A0A166EXC0 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Uncharacterized protein. | 0.565 |
A0A166A2M6 | A0A166HCC8 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.476 |
A0A166BA20 | A0A166A2M6 | Malic enzyme. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.894 |
A0A166BA20 | A0A166CCB5 | Malic enzyme. | Malic enzyme. | 0.763 |
A0A166BA20 | A0A166D272 | Malic enzyme. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.529 |
A0A166BA20 | A0A166EIH7 | Malic enzyme. | NAD dehydrogenase. | 0.778 |
A0A166BA20 | A0A166EXC0 | Malic enzyme. | Uncharacterized protein. | 0.438 |
A0A166BPD8 | A0A166ELQ8 | Phosphoribosylamine--glycine ligase. | Amidophosphoribosyltransferase. | 0.998 |
A0A166BPD8 | A0A166EXC0 | Phosphoribosylamine--glycine ligase. | Uncharacterized protein. | 0.576 |
A0A166CCB5 | A0A166A2M6 | Malic enzyme. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.894 |
A0A166CCB5 | A0A166BA20 | Malic enzyme. | Malic enzyme. | 0.763 |
A0A166CCB5 | A0A166D272 | Malic enzyme. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.529 |
A0A166CCB5 | A0A166EIH7 | Malic enzyme. | NAD dehydrogenase. | 0.778 |
A0A166CCB5 | A0A166EXC0 | Malic enzyme. | Uncharacterized protein. | 0.438 |
A0A166CEI1 | A0A166EXC0 | Beta-hexosaminidase. | Uncharacterized protein. | 0.440 |
A0A166D272 | A0A166A2M6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.829 |
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