STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166G5F4Uncharacterized protein. (244 aa)    
Predicted Functional Partners:
A0A166EXU4
Small nuclear ribonucleoprotein Sm D2.
   
  0.786
A0A166IK95
Utp14-domain-containing protein.
   
 0.785
A0A165XF53
LSM-domain-containing protein.
   
  0.782
A0A166IA76
Small nuclear ribonucleoprotein Sm D3.
   
 0.772
A0A166HHG3
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.767
A0A166J956
Nuclear matrix protein NMP200.
   
 0.766
A0A165Z852
U3 small nucleolar RNA-associated protein 22.
   
  0.752
A0A166BAF6
PWI domain-containing protein.
   
 0.749
A0A166HEB8
Sas10 domain-containing protein.
   
 0.747
A0A165WHE5
RNA-binding domain-containing protein.
   
  0.745
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.