STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166G5Z7ATP-dependent metallopeptidase Hfl. (830 aa)    
Predicted Functional Partners:
A0A166BPP6
Prohibitin.
   
 0.961
A0A166CUU7
Prohibitin.
   
 0.910
A0A166IKR9
Ribosomal protein L2.
   
 
 0.848
A0A166BQM1
Uncharacterized protein; Belongs to the peptidase M16 family.
  
 0.847
A0A166CIM2
60S ribosomal protein L23.
  
 
 0.832
A0A166CME8
Uncharacterized protein.
   
 
 0.827
A0A166CMR2
Translational machinery component.
   
 
 0.822
A0A166HH80
Uncharacterized protein; Belongs to the peptidase M16 family.
  
 0.821
A0A166EBQ8
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.819
A0A166IHN0
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.814
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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