Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A165ZMK4 | A0A166GY10 | Uncharacterized protein. | BHLH domain-containing protein. | 0.629 |
A0A165ZNP4 | A0A166GY10 | 14-3-3 protein; Belongs to the 14-3-3 family. | BHLH domain-containing protein. | 0.479 |
A0A166AGV3 | A0A166GY10 | BHLH domain-containing protein. | BHLH domain-containing protein. | 0.507 |
A0A166BS55 | A0A166GY10 | Protein BMH2; Belongs to the 14-3-3 family. | BHLH domain-containing protein. | 0.479 |
A0A166BT90 | A0A166GY10 | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | BHLH domain-containing protein. | 0.608 |
A0A166BT90 | A0A166IP98 | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.449 |
A0A166CYD3 | A0A166GY10 | TPR-like protein. | BHLH domain-containing protein. | 0.629 |
A0A166DE21 | A0A166GY10 | ARM repeat-containing protein. | BHLH domain-containing protein. | 0.571 |
A0A166GY10 | A0A165ZMK4 | BHLH domain-containing protein. | Uncharacterized protein. | 0.629 |
A0A166GY10 | A0A165ZNP4 | BHLH domain-containing protein. | 14-3-3 protein; Belongs to the 14-3-3 family. | 0.479 |
A0A166GY10 | A0A166AGV3 | BHLH domain-containing protein. | BHLH domain-containing protein. | 0.507 |
A0A166GY10 | A0A166BS55 | BHLH domain-containing protein. | Protein BMH2; Belongs to the 14-3-3 family. | 0.479 |
A0A166GY10 | A0A166BT90 | BHLH domain-containing protein. | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | 0.608 |
A0A166GY10 | A0A166CYD3 | BHLH domain-containing protein. | TPR-like protein. | 0.629 |
A0A166GY10 | A0A166DE21 | BHLH domain-containing protein. | ARM repeat-containing protein. | 0.571 |
A0A166GY10 | A0A166HZJ2 | BHLH domain-containing protein. | Opi1-domain-containing protein. | 0.648 |
A0A166GY10 | A0A166I1K1 | BHLH domain-containing protein. | CHAT domain-containing protein. | 0.629 |
A0A166GY10 | A0A166IP98 | BHLH domain-containing protein. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.480 |
A0A166HZJ2 | A0A166GY10 | Opi1-domain-containing protein. | BHLH domain-containing protein. | 0.648 |
A0A166I1K1 | A0A166GY10 | CHAT domain-containing protein. | BHLH domain-containing protein. | 0.629 |
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