STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166GYD7Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. (2010 aa)    
Predicted Functional Partners:
A0A166CNG6
Isocitrate/isopropylmalate dehydrogenase.
 
 0.939
A0A166JBX5
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 
 
0.899
A0A166G0V7
Citrate synthase; Belongs to the citrate synthase family.
  
 0.894
A0A166G3R1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.894
A0A166IU58
Citrate synthase; Belongs to the citrate synthase family.
  
 0.894
A0A166ESF4
Uncharacterized protein.
  
 0.835
A0A166ESG0
Uncharacterized protein.
  
 0.835
A0A166F452
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.835
A0A166JB24
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.815
A0A166DBC2
Iso_dh domain-containing protein.
  
 0.791
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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