STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166HAI7Cis-golgi transport vesicle tethering complex subunit. (826 aa)    
Predicted Functional Partners:
A0A166C269
COG4-domain-containing protein.
    
 0.994
A0A166IRV5
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.994
A0A166GC86
Uncharacterized protein.
  
 0.993
A0A166J200
Dor1-domain-containing protein.
    
 0.993
A0A166IA88
COG complex component.
   
 0.991
A0A166IHF6
Uncharacterized protein.
   
 0.990
A0A166IZ80
Uncharacterized protein.
    
 0.989
A0A166BPJ4
t-SNARE.
    
 0.880
A0A166F9Y6
Vesicle transport v-snare protein vti1.
   
 
 0.878
A0A166I7Y1
Gelsolin-like domain-containing protein.
    
 
 0.868
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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