STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166HFQ5Isocitrate lyase. (539 aa)    
Predicted Functional Partners:
A0A166I6M5
Malate synthase; Belongs to the malate synthase family.
 
 
 0.998
A0A166JBX5
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.897
A0A166EH35
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.896
A0A166CY15
PLP-dependent transferase.
  
 
 0.875
A0A166G0V7
Citrate synthase; Belongs to the citrate synthase family.
  
 0.860
A0A166G3R1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.860
A0A166IU58
Citrate synthase; Belongs to the citrate synthase family.
  
 0.860
A0A166GNX2
Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
 
  
 0.821
A0A166A2M6
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.820
A0A166E1E5
Multifunctional beta-oxidation protein.
  
 
 0.809
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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