Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A165ZXS0 | A0A166DAZ1 | TPR-like protein. | Uncharacterized protein. | 0.997 |
A0A165ZXS0 | A0A166HGY6 | TPR-like protein. | Uncharacterized protein. | 0.673 |
A0A165ZXS0 | A0A166IUW8 | TPR-like protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.867 |
A0A166CMR2 | A0A166CZ15 | Translational machinery component. | JmjC domain-containing protein. | 0.817 |
A0A166CMR2 | A0A166HGY6 | Translational machinery component. | Uncharacterized protein. | 0.653 |
A0A166CZ15 | A0A166CMR2 | JmjC domain-containing protein. | Translational machinery component. | 0.817 |
A0A166CZ15 | A0A166D272 | JmjC domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.637 |
A0A166CZ15 | A0A166HGY6 | JmjC domain-containing protein. | Uncharacterized protein. | 0.715 |
A0A166D272 | A0A166CZ15 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | JmjC domain-containing protein. | 0.637 |
A0A166D272 | A0A166HGY6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.815 |
A0A166DAZ1 | A0A165ZXS0 | Uncharacterized protein. | TPR-like protein. | 0.997 |
A0A166DAZ1 | A0A166HGY6 | Uncharacterized protein. | Uncharacterized protein. | 0.654 |
A0A166DAZ1 | A0A166IUW8 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.836 |
A0A166FD10 | A0A166FDL3 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.671 |
A0A166FD10 | A0A166HCQ3 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.672 |
A0A166FD10 | A0A166HGY6 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Uncharacterized protein. | 0.651 |
A0A166FDL3 | A0A166FD10 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.671 |
A0A166FDL3 | A0A166HGY6 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Uncharacterized protein. | 0.651 |
A0A166HCQ3 | A0A166FD10 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.672 |
A0A166HCQ3 | A0A166HGY6 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Uncharacterized protein. | 0.651 |
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