STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166HJV2SprT-like domain-containing protein. (444 aa)    
Predicted Functional Partners:
A0A166HKB8
BTB domain-containing protein.
    
 0.792
A0A166IZI6
TATA-binding protein.
    
 0.792
A0A165XXX5
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.752
A0A165ZV74
HIT-like protein.
    
 0.746
A0A165ZVA7
HIT domain-containing protein.
    
 0.746
A0A166B9E0
HIT-like protein.
    
 0.746
A0A166HDZ7
HIT-like protein.
    
 0.719
A0A166HRC2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.704
A0A166BD46
RNA polymerase I associated factor, A49-like protein.
     
 0.692
A0A166HQC0
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.685
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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