STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166HPF2PCI domain-containing protein. (393 aa)    
Predicted Functional Partners:
A0A166GM92
Uncharacterized protein.
    
 
 0.965
A0A166AIU0
Uncharacterized protein.
   
 
 0.954
A0A166CXY1
PCI domain-containing protein.
   
 
 0.948
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 
 0.883
A0A166HG63
Uncharacterized protein.
   
 
 0.841
A0A166F1I5
Ca2+-binding EF-hand superfamily protein.
    
 
 0.834
A0A166HGZ0
EF-hand.
    
 
 0.834
A0A166EVE2
NTF2-like protein.
    
 
 0.612
A0A166FFU3
Myosin II light chain.
    
 
 0.496
A0A166G6U4
EF-hand.
    
 
 0.496
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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