STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166HV12Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
A0A166AY23
Arginase/deacetylase.
    
  0.529
A0A166DUC8
Arginase/deacetylase.
    
  0.529
A0A166I9R0
Histone deacetylase clr3.
    
  0.529
A0A166BGA9
Hist_deacetyl domain-containing protein.
    
  0.511
A0A166CIQ1
Histone deacetylase.
    
  0.511
A0A166ECP9
Histone deacetylase complex protein.
    
  0.511
A0A166IP69
Histone deacetylase Hda1.
    
  0.511
A0A166HZX6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.415
A0A166CS23
Phosphotransferase KptA/Tpt1.
     
 0.408
A0A165XPS9
FAD/NAD(P)-binding domain-containing protein.
  
 0.404
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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