STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166HVZ3WD40 repeat-like protein. (456 aa)    
Predicted Functional Partners:
A0A166IRE4
TRASH domain-containing protein.
   
 
 0.941
A0A165Z4X5
Brix-domain-containing protein.
   
 
 0.939
A0A166DUQ6
Ribosomal protein L1.
   
 
 0.898
A0A166G5X6
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.896
A0A166FLK4
Ebp2-domain-containing protein.
   
 
 0.892
A0A166DU68
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.875
A0A166G1S1
RNA-binding domain-containing protein.
   
 
 0.860
A0A166ITA3
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.860
A0A166E9V3
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.859
A0A165XNY9
Brix-domain-containing protein.
   
 
 0.855
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.