STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166I5N8P-loop containing nucleoside triphosphate hydrolase protein. (2325 aa)    
Predicted Functional Partners:
A0A166HVP7
Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.641
A0A166H616
Piwi-domain-containing protein.
 
  
 
 0.552
A0A166EIU6
Argonaute-like protein.
 
  
 
 0.534
A0A166CPY4
NTP_transf_2 domain-containing protein.
    
 
 0.516
A0A166E6B6
Uncharacterized protein.
    
 
 0.516
A0A166E6J9
Nucleotidyltransferase.
    
 
 0.516
A0A166E6F0
RNA-dependent RNA polymerase.
    
 
 0.514
A0A166EXV8
RNA-dependent RNA polymerase.
    
 
 0.514
A0A166I6D1
RNA-dependent RNA polymerase.
    
 
 0.514
A0A166FYS5
Adenosine deaminase/editase.
   
  
 0.513
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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