STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166IDU5BRCT domain-containing protein. (622 aa)    
Predicted Functional Partners:
A0A166I083
WD40 repeat-like protein.
   
 0.662
A0A166IJ16
Ipi1_N domain-containing protein.
    
 0.649
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.648
A0A165ZS67
Uncharacterized protein.
    
 0.611
A0A166IKR9
Ribosomal protein L2.
    
 0.605
A0A166HJH0
Las1-domain-containing protein.
    
  0.600
A0A165YEA7
CLP1_P domain-containing protein.
    
  0.581
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.564
A0A166IDS6
Phytanoyl-CoA dioxygenase.
 
      0.564
A0A166GBN0
Uncharacterized protein.
  
 
  0.555
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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