STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166IRQ5Fibrillarin. (308 aa)    
Predicted Functional Partners:
A0A165ZA39
WD40 repeat-like protein.
   
 0.999
A0A166A9F6
Nop-domain-containing protein.
   
 0.999
A0A166FY16
Nop domain-containing protein.
   
 0.999
A0A166IFD5
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
A0A165Z852
U3 small nucleolar RNA-associated protein 22.
   
 0.998
A0A166CG63
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.998
A0A166J9E4
WD40 repeat-like protein.
   
 0.997
A0A165YM65
WD40 repeat-like protein.
   
 0.996
A0A166CPP9
BP28CT domain-containing protein.
   
 0.996
A0A166FZ54
WD40 repeat-like protein.
   
 0.996
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.