STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166J349PLP-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (488 aa)    
Predicted Functional Partners:
A0A166CY15
PLP-dependent transferase.
  
 0.925
A0A166EZJ4
Biotin synthase.
 
    
 0.915
A0A166D3M7
HECT domain-containing protein.
 
      0.899
A0A166BKM8
Aspartate kinase.
    
 0.886
A0A166A8Y6
AlcB domain-containing protein.
  
 
 0.878
A0A166CJN4
Aspartate-semialdehyde dehydrogenase.
    
 0.876
A0A165ZLQ5
Acetylglutamate kinase ARG6; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.874
A0A166AJG7
Homoserine dehydrogenase.
    
 0.866
A0A166IIW0
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.865
A0A166GCN1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.857
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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