STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166J664Chondroitin AC/alginate lyase. (631 aa)    
Predicted Functional Partners:
A0A166GUF8
FYVE-type domain-containing protein.
   
 0.922
A0A165WV18
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.893
A0A166G4M7
Phosphatidylinositol 3-kinase VPS34.
    
 0.880
A0A165Y880
FAD/NAD(P)-binding domain-containing protein.
   
 0.823
A0A166HYF8
Uncharacterized protein.
    
 0.815
A0A166HYB3
VPS9 domain-containing protein.
    
 0.813
A0A166J718
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.798
A0A166H0G4
MBOAT_2 domain-containing protein.
    
 0.786
A0A166GTU9
Rab-protein geranylgeranyltransferase.
    
 0.768
A0A166A8R0
Ras-domain-containing protein.
   
 0.761
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.