STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166JCF4Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
A0A166E719
Lumazine synthase.
  
 
 0.956
A0A166HH38
Putative riboflavin synthase, alpha chain.
  
 0.948
A0A166F0M5
DUF1688-domain-containing protein.
 
  
 0.947
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
 
      0.827
A0A166DX97
Coronin; Belongs to the WD repeat coronin family.
  
 0.793
A0A166GSY1
PH domain-containing protein.
  
 0.793
A0A166E0M3
Aldolase; Belongs to the DapA family.
      0.736
A0A166D5V7
Pantoate-beta-alanine ligase.
    
 0.733
A0A166IS44
CMP/dCMP-type deaminase domain-containing protein.
  
 0.721
A0A165YXV5
Riboflavin kinase.
    
 0.703
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.