STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3PAG9RabGAP/TBC. (828 aa)    
Predicted Functional Partners:
A0A5C3P7N7
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.958
A0A5C3Q8P3
Ras-domain-containing protein.
   
 
 0.806
A0A5C3NWA3
Uncharacterized protein.
   
 
 0.803
A0A5C3PT06
Uncharacterized protein.
   
 
 0.803
A0A5C3NWY1
Uncharacterized protein.
   
 
 0.794
A0A5C3PKF1
Vacuolar protein sorting-associated protein 26.
   
 
 0.794
A0A5C3PXC1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
      0.583
A0A5C3NV75
RabGAP/TBC.
    
 
0.532
A0A5C3PH67
Rab-GAP TBC domain-containing protein.
    
 
 0.526
A0A5C3PEV2
GTPase.
    
 
 0.513
Your Current Organism:
Polyporus arcularius
NCBI taxonomy Id: 1314778
Other names: P. arcularius HHB13444, Polyporus arcularius HHB13444
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