STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165CRM8RNA-dependent RNA polymerase. (810 aa)    
Predicted Functional Partners:
A0A165JHT3
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.501
A0A165MDQ3
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.501
A0A165QRM6
Uncharacterized protein.
    
 
 0.501
A0A165GF49
Exonuclease domain-containing protein.
    
 
 0.500
A0A165DWP1
Nucleotidyltransferase.
    
 
 0.472
A0A165DWP8
Uncharacterized protein.
    
 
 0.472
A0A165QLT9
RBP11-like subunits of RNA polymerase.
    
 
 0.437
A0A165CQQ3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
   0.436
A0A165GH25
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
   0.436
A0A166BUE9
Insert subdomain of RNA polymerase alpha subunit.
    
   0.436
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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