A0A165DEU3 protein (Exidia glandulosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A165DEU3

NAD(P)-binding protein. (291 aa)

Predicted Functional Partners:

A0A165KTE2

0.633

A0A166AWB7

0.630

A0A165NVT3

0.538

A0A165DYH3

0.530

A0A165I4Y3

0.528

A0A165E4T6

0.514

A0A165EB62

0.514

A0A166AY03

0.508

A0A165MBZ2

0.506

A0A166ASV4

0.500

Your Current Organism:

Exidia glandulosa

NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165DEU3	A0A165DYH3	NAD(P)-binding protein.	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.530
A0A165DEU3	A0A165E4T6	NAD(P)-binding protein.	Short-chain dehydrogenase.	0.514
A0A165DEU3	A0A165EB62	NAD(P)-binding protein.	Short-chain dehydrogenase.	0.514
A0A165DEU3	A0A165I4Y3	NAD(P)-binding protein.	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.528
A0A165DEU3	A0A165KTE2	NAD(P)-binding protein.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.633
A0A165DEU3	A0A165MBZ2	NAD(P)-binding protein.	Phosphatases II.	0.506
A0A165DEU3	A0A165NVT3	NAD(P)-binding protein.	Protein kinase domain-containing protein.	0.538
A0A165DEU3	A0A166ASV4	NAD(P)-binding protein.	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.500
A0A165DEU3	A0A166AWB7	NAD(P)-binding protein.	Anti-silencing protein.	0.630
A0A165DEU3	A0A166AY03	NAD(P)-binding protein.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.508
A0A165DYH3	A0A165DEU3	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	NAD(P)-binding protein.	0.530
A0A165E4T6	A0A165DEU3	Short-chain dehydrogenase.	NAD(P)-binding protein.	0.514
A0A165EB62	A0A165DEU3	Short-chain dehydrogenase.	NAD(P)-binding protein.	0.514
A0A165I4Y3	A0A165DEU3	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	NAD(P)-binding protein.	0.528
A0A165KTE2	A0A165DEU3	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	NAD(P)-binding protein.	0.633
A0A165KTE2	A0A166AWB7	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Anti-silencing protein.	0.999
A0A165MBZ2	A0A165DEU3	Phosphatases II.	NAD(P)-binding protein.	0.506
A0A165MBZ2	A0A165NVT3	Phosphatases II.	Protein kinase domain-containing protein.	0.779
A0A165MBZ2	A0A166AY03	Phosphatases II.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.600
A0A165NVT3	A0A165DEU3	Protein kinase domain-containing protein.	NAD(P)-binding protein.	0.538