STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
A0A165DPC7DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)    
Predicted Functional Partners:
A0A165PZN4
RBP11-like subunits of RNA polymerase.
  
 0.999
A0A165GH25
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.998
A0A165N5X1
Uncharacterized protein.
   
 0.998
A0A165BAI5
RPB5 subunit of DNA-directed RNA polymerase.
   
 0.997
A0A165EWG7
RPOLD domain-containing protein.
   
 0.997
A0A165IHN1
Uncharacterized protein.
   
 0.997
A0A165JL38
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.997
A0A165L177
Uncharacterized protein.
   
 0.997
A0A165M9J5
Subunit common to RNA polymerase I.
   
 0.996
A0A165J230
RNA polymerase I-specific transcription initiation factor RRN3.
   
 0.988
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.