STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165ELA5tRNA pseudouridine synthase. (493 aa)    
Predicted Functional Partners:
A0A165F5D0
Pseudouridine synthase.
   
 0.854
A0A165F316
Putative rRNA pseudouridine synthase.
   
 0.830
A0A165MCJ3
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.804
A0A165CPB2
Uncharacterized protein.
   
   0.733
A0A166A4A2
mRNA export factor elf1.
   
   0.722
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.714
TRM82-2
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.714
A0A165EZJ3
Ribosomal RNA processing protein.
   
    0.713
A0A165EWG7
RPOLD domain-containing protein.
  
  
 0.696
A0A166BUE9
Insert subdomain of RNA polymerase alpha subunit.
  
  
 0.696
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.