STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165GIX3Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
A0A165MPG8
Uncharacterized protein.
    
 0.982
LSM1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
    
 0.956
A0A165MZ42
PAT1 domain-containing protein.
    
 0.952
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.951
A0A165GIW2
XRN1_D1 domain-containing protein.
 
     0.950
A0A165F316
Putative rRNA pseudouridine synthase.
    
 
 0.918
A0A165CME4
Guanine nucleotide binding protein beta subunit.
    
 
 0.909
A0A165PFP8
Uncharacterized protein.
    
 0.900
A0A165JLA3
RNA-binding domain-containing protein.
    
 
 0.879
A0A165C6H9
Nudix hydrolase domain-containing protein.
   
 0.873
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.