Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A165BJH6 | A0A165GK46 | Ribosome recycling factor. | Uncharacterized protein. | 0.493 |
A0A165BJH6 | A0A165QU31 | Ribosome recycling factor. | Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.493 |
A0A165GK46 | A0A165BJH6 | Uncharacterized protein. | Ribosome recycling factor. | 0.493 |
A0A165GK46 | A0A165QU31 | Uncharacterized protein. | Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.415 |
A0A165GK46 | A0A166A2V1 | Uncharacterized protein. | GTP-binding protein 1. | 0.452 |
A0A165GK46 | A0A166AKK6 | Uncharacterized protein. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.408 |
A0A165QU31 | A0A165BJH6 | Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | Ribosome recycling factor. | 0.493 |
A0A165QU31 | A0A165GK46 | Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | Uncharacterized protein. | 0.415 |
A0A166A2V1 | A0A165GK46 | GTP-binding protein 1. | Uncharacterized protein. | 0.452 |
A0A166AKK6 | A0A165GK46 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Uncharacterized protein. | 0.408 |