STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165I8X8TPR-like protein. (889 aa)    
Predicted Functional Partners:
A0A165AZS0
WD40 repeat-like protein.
   
    0.864
A0A165QVI1
WD-repeat-containing protein.
   
  
 0.789
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
    0.775
A0A165NCW6
WD40 repeat-like protein.
   
  
 0.744
A0A166MSP4
WD40 repeat-like protein.
   
    0.740
A0A165BHG4
Utp21-domain-containing protein.
   
    0.706
A0A165BVY1
Utp21-domain-containing protein.
   
    0.706
A0A165JKQ2
NUC173 domain-containing protein.
   
    0.699
A0A165NMF1
Ribosome biogenesis protein tsr1.
   
    0.698
A0A166BIQ2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.667
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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