STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165K0D5ARM repeat-containing protein. (1023 aa)    
Predicted Functional Partners:
A0A165DH54
CAF1-domain-containing protein.
    
 
 0.734
A0A165ZG50
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
    
 
 0.699
A0A166BDU5
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.684
A0A165KD94
SKIP_SNW domain-containing protein.
    
  0.629
A0A165QY68
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
   0.615
A0A166ALI6
RhoGAP-domain-containing protein.
    
 
 0.603
A0A165FJR6
Uncharacterized protein.
     
 0.595
A0A165HUT8
Protein prenylyltransferase.
    
  0.595
A0A165J7Z3
ARM repeat-containing protein.
    
 
 0.545
A0A165EC54
RNB-domain-containing protein.
   
   0.468
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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