A0A165N6U8 protein (Exidia glandulosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A165N6U8

Uncharacterized protein. (476 aa)

Predicted Functional Partners:

A0A165QX74

0.658

A0A166BTI7

0.604

A0A165C7F3

0.581

A0A165Q7J0

0.580

A0A166B364

0.469

A0A165DQM3

0.437

A0A165DQM7

0.437

A0A165FUB8

0.437

A0A165GFH9

0.437

A0A165H608

0.437

Your Current Organism:

Exidia glandulosa

NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165C7F3	A0A165DQM3	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	RCC1/BLIP-II protein.	0.557
A0A165C7F3	A0A165DQM7	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	RCC1/BLIP-II protein.	0.557
A0A165C7F3	A0A165FUB8	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	CHAT domain-containing protein.	0.557
A0A165C7F3	A0A165GFH9	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Uncharacterized protein.	0.557
A0A165C7F3	A0A165H608	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	RCC1/BLIP-II protein.	0.557
A0A165C7F3	A0A165N6U8	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Uncharacterized protein.	0.581
A0A165C7F3	A0A165Q7J0	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	Putative endoplasmic reticulum insertion protein SEC61.	0.786
A0A165C7F3	A0A166BTI7	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	COX15-CtaA-domain-containing protein.	0.957
A0A165DQM3	A0A165C7F3	RCC1/BLIP-II protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.557
A0A165DQM3	A0A165N6U8	RCC1/BLIP-II protein.	Uncharacterized protein.	0.437
A0A165DQM3	A0A165Q7J0	RCC1/BLIP-II protein.	Putative endoplasmic reticulum insertion protein SEC61.	0.557
A0A165DQM3	A0A166BTI7	RCC1/BLIP-II protein.	COX15-CtaA-domain-containing protein.	0.433
A0A165DQM7	A0A165C7F3	RCC1/BLIP-II protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.557
A0A165DQM7	A0A165N6U8	RCC1/BLIP-II protein.	Uncharacterized protein.	0.437
A0A165DQM7	A0A165Q7J0	RCC1/BLIP-II protein.	Putative endoplasmic reticulum insertion protein SEC61.	0.557
A0A165DQM7	A0A166BTI7	RCC1/BLIP-II protein.	COX15-CtaA-domain-containing protein.	0.433
A0A165FUB8	A0A165C7F3	CHAT domain-containing protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.557
A0A165FUB8	A0A165N6U8	CHAT domain-containing protein.	Uncharacterized protein.	0.437
A0A165FUB8	A0A165Q7J0	CHAT domain-containing protein.	Putative endoplasmic reticulum insertion protein SEC61.	0.557
A0A165FUB8	A0A166BTI7	CHAT domain-containing protein.	COX15-CtaA-domain-containing protein.	0.433