STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165R360VIT-domain-containing protein. (932 aa)    
Predicted Functional Partners:
A0A165E604
Brix-domain-containing protein.
   
 
 0.678
A0A165R1N9
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.647
A0A165QY24
60s ribosomal protein l5-b.
    
 
 0.634
A0A165CJM9
Uncharacterized protein.
    
 
 0.541
A0A165KIP9
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.541
A0A165DQA6
Brix-domain-containing protein.
   
    0.477
A0A165IZY0
Glutamate-rich WD repeat containing.
   
  
 0.470
A0A165F311
RRM domain-containing protein.
   
 
 0.465
A0A165QPF4
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.460
A0A165EWK3
Uncharacterized protein.
   
  
 0.445
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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