A0A166BE63 protein (Exidia glandulosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A166BE63

Uncharacterized protein. (473 aa)

Predicted Functional Partners:

A0A165QW57

0.818

A0A165Q6U3

0.794

A0A165EP10

0.759

A0A165HWI6

0.759

A0A165R150

0.759

A0A165MHT9

0.746

A0A165IXW4

0.687

A0A165R394

0.687

A0A165IBB2

0.669

A0A165ZB45

0.669

Your Current Organism:

Exidia glandulosa

NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165EP10	A0A165IBB2	Spindle pole body component.	Spindle pole body component.	0.986
A0A165EP10	A0A165IXW4	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.980
A0A165EP10	A0A165MHT9	Spindle pole body component.	Spindle pole body component.	0.995
A0A165EP10	A0A165QW57	Spindle pole body component.	Spindle pole body component.	0.995
A0A165EP10	A0A165R150	Spindle pole body component.	Spindle pole body component.	0.993
A0A165EP10	A0A165R394	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.980
A0A165EP10	A0A165ZB45	Spindle pole body component.	Spindle pole body component.	0.986
A0A165EP10	A0A166BE63	Spindle pole body component.	Uncharacterized protein.	0.759
A0A165HWI6	A0A165IBB2	Uncharacterized protein.	Spindle pole body component.	0.957
A0A165HWI6	A0A165IXW4	Uncharacterized protein.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.954
A0A165HWI6	A0A165MHT9	Uncharacterized protein.	Spindle pole body component.	0.971
A0A165HWI6	A0A165QW57	Uncharacterized protein.	Spindle pole body component.	0.970
A0A165HWI6	A0A165R394	Uncharacterized protein.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.954
A0A165HWI6	A0A165ZB45	Uncharacterized protein.	Spindle pole body component.	0.957
A0A165HWI6	A0A166BE63	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A165IBB2	A0A165EP10	Spindle pole body component.	Spindle pole body component.	0.986
A0A165IBB2	A0A165HWI6	Spindle pole body component.	Uncharacterized protein.	0.957
A0A165IBB2	A0A165IXW4	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.979
A0A165IBB2	A0A165MHT9	Spindle pole body component.	Spindle pole body component.	0.987
A0A165IBB2	A0A165QW57	Spindle pole body component.	Spindle pole body component.	0.986