STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165PLK2Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
A0A165U2W0
Histone acetyltransferase type B subunit 2.
    
  0.526
A0A165TDU3
Replication protein A, subunit RPA32.
    
  0.501
A0A165SPS1
ERCC4 domain-containing protein.
    
  0.448
A0A165TDR4
Nucleic acid-binding protein.
    
  0.426
A0A165UN27
Carbohydrate esterase family 16 protein.
    
  0.426
A0A165TXZ8
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.419
Your Current Organism:
Neolentinus lepideus
NCBI taxonomy Id: 1314782
Other names: N. lepideus HHB14362 ss-1, Neolentinus lepideus HHB14362 ss-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.