STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165MJA6RRM Nup35-type domain-containing protein. (397 aa)    
Predicted Functional Partners:
A0A165T1R2
Nucleoporin.
    
  0.814
A0A165PQ49
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.758
A0A165SYB6
Translational machinery component.
    
  0.731
A0A165MC26
Ribosomal protein S2.
   
  0.722
A0A165SKE2
Ribosomal protein S5 domain 2-like protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.722
A0A165MPB5
Uncharacterized protein.
    
  0.721
A0A165UM55
Ribosomal protein S16.
   
  0.720
A0A165TH25
S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.717
A0A165Q040
L51_S25_CI-B8 domain-containing protein.
    
  0.716
A0A165LJE8
Uncharacterized protein.
    
  0.715
Your Current Organism:
Daedalea quercina
NCBI taxonomy Id: 1314783
Other names: D. quercina L-15889, Daedalea quercina L-15889
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