STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WPQ840S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (61 aa)    
Predicted Functional Partners:
A0A1Y1YL21
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.996
A0A1Y1XN71
40S ribosomal protein S20-like protein.
   
 0.991
A0A1Y1YZX8
40S ribosomal protein S20.
   
 0.991
A0A1Y1XSF9
Uncharacterized protein.
   
 
 0.990
A0A1Y1Z7T0
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.990
A0A1Y1XUN8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.988
A0A1Y1Y774
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.988
A0A1Y1Z6I7
Ribosomal protein S14.
   
 0.988
A0A1Y1Z796
Ribosomal protein S14.
   
 0.988
A0A1Y1YCH5
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.984
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.