STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XJG2Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)    
Predicted Functional Partners:
A0A1Y1YLI2
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.999
A0A1Y1ZAB0
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.999
A0A1Y1XSF9
Uncharacterized protein.
   
 0.994
A0A1Y1VYR0
60S ribosomal protein L5.
  
 0.993
A0A1Y1YKB8
Ribosomal_L18_c domain-containing protein.
  
 0.993
A0A1Y1Z7T0
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.992
A0A1Y1Y620
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.991
A0A1Y1YCH5
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.991
A0A1Y1YDK7
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.991
A0A1Y1X7G4
30S ribosomal protein S6.
  
 
 0.990
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.