STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XUL8WD40 repeat-like protein. (386 aa)    
Predicted Functional Partners:
A0A1Y1XY44
Uncharacterized protein.
    
 0.992
A0A1Y1XYH7
CPSF_A domain-containing protein.
    
 0.982
A0A1Y1Y0A7
DNA damage-binding protein 1-like protein.
    
 0.982
A0A1Y1YC42
RING/U-box.
    
 0.976
A0A1Y1YVY5
Uncharacterized protein.
    
 
 0.971
A0A1Y1Z4I6
Leo1-domain-containing protein.
    
 
 0.971
A0A1Y1Y6X1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.965
A0A1Y1X8J4
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.961
A0A1Y1YMQ0
RNA polymerase small Zn-binding subunit.
    
  0.961
A0A1Y1XX11
Putative RNA polymerases L.
    
  0.960
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
Server load: low (14%) [HD]