Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1Y1XLN4 | A0A1Y1XUQ0 | Uncharacterized protein. | R3H domain-containing protein. | 0.673 |
A0A1Y1XRQ7 | A0A1Y1XUQ0 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | R3H domain-containing protein. | 0.619 |
A0A1Y1XRQ7 | A0A1Y1Y8S5 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RBP11-like subunits of RNA polymerase. | 0.998 |
A0A1Y1XRQ7 | A0A1Y1YEU7 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Phenylalanyl-tRNA synthetase. | 0.417 |
A0A1Y1XRQ7 | A0A1Y1Z7Q3 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.879 |
A0A1Y1XUQ0 | A0A1Y1XLN4 | R3H domain-containing protein. | Uncharacterized protein. | 0.673 |
A0A1Y1XUQ0 | A0A1Y1XRQ7 | R3H domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.619 |
A0A1Y1XUQ0 | A0A1Y1XVY1 | R3H domain-containing protein. | Mitochondrial processing peptidase beta subunit; Belongs to the peptidase M16 family. | 0.691 |
A0A1Y1XUQ0 | A0A1Y1XZD3 | R3H domain-containing protein. | Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.673 |
A0A1Y1XUQ0 | A0A1Y1Y6A5 | R3H domain-containing protein. | P-loop containing nucleoside triphosphate hydrolase protein. | 0.506 |
A0A1Y1XUQ0 | A0A1Y1Y8S5 | R3H domain-containing protein. | RBP11-like subunits of RNA polymerase. | 0.574 |
A0A1Y1XUQ0 | A0A1Y1YEU7 | R3H domain-containing protein. | Phenylalanyl-tRNA synthetase. | 0.449 |
A0A1Y1XUQ0 | A0A1Y1YK02 | R3H domain-containing protein. | Mitochondrial processing peptidase complex beta subunit Qcr1; Belongs to the peptidase M16 family. | 0.615 |
A0A1Y1XUQ0 | A0A1Y1YRM5 | R3H domain-containing protein. | Mitochondrial processing peptidase beta subunit. | 0.691 |
A0A1Y1XUQ0 | A0A1Y1Z7Q3 | R3H domain-containing protein. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.470 |
A0A1Y1XVY1 | A0A1Y1XUQ0 | Mitochondrial processing peptidase beta subunit; Belongs to the peptidase M16 family. | R3H domain-containing protein. | 0.691 |
A0A1Y1XZD3 | A0A1Y1XUQ0 | Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | R3H domain-containing protein. | 0.673 |
A0A1Y1Y6A5 | A0A1Y1XUQ0 | P-loop containing nucleoside triphosphate hydrolase protein. | R3H domain-containing protein. | 0.506 |
A0A1Y1Y8S5 | A0A1Y1XRQ7 | RBP11-like subunits of RNA polymerase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
A0A1Y1Y8S5 | A0A1Y1XUQ0 | RBP11-like subunits of RNA polymerase. | R3H domain-containing protein. | 0.574 |
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