STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XWG7Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (760 aa)    
Predicted Functional Partners:
A0A1Y1YQ99
Uncharacterized protein.
   
0.989
A0A1Y1YKY7
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
   
 0.985
A0A1Y1X7F2
Uncharacterized protein.
   
0.982
A0A1Y1Z8H9
Uncharacterized protein.
   
0.982
A0A1Y1ZD05
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.975
A0A1Y1XXX9
Snare-like protein; Belongs to the synaptobrevin family.
   
 0.974
A0A1Y1XC66
WD40 repeat-like protein.
   
 0.973
A0A1Y1XYN2
WD40 repeat-like protein.
   
 0.973
A0A1Y1Y5V4
Small COPII coat GTPase sar1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.962
A0A1Y1Y9Q8
ARF/SAR superfamily; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.962
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
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