STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1XX31DUF262 domain-containing protein. (448 aa)    
Predicted Functional Partners:
A0A1Y1YJF7
Uncharacterized protein.
    
 0.916
A0A1Y1ZDK1
SYF2-domain-containing protein.
    
 0.907
A0A1Y1Z4V1
Slu7 domain-containing protein.
    
 0.899
A0A1Y1Y9K1
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.896
A0A1Y1YCQ7
Small nuclear ribonucleoprotein G.
    
 0.896
A0A1Y1Z207
Cir_N domain-containing protein.
   
 0.896
A0A1Y1XUQ1
WD40 repeat-like protein.
   
 0.892
A0A1Y1Y0D2
WD40 repeat-like protein.
   
 0.892
A0A1Y1YB15
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.890
A0A1Y1XTJ7
PWI domain-containing protein.
   
 0.887
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.